# ChIP-Atlas 3.0: a data-mining suite to explore chromosome architecture together with large-scale regulome data

*PRI Rank #11 · Topics and Trends in Most Cited Epigenetics and DNA Methylation Papers, Class of 2026*

*Canonical URL: https://pri.pepkio.com/top-papers/epigenetics-and-dna-methylation/2026/rank-11*

| Field | Value |
| --- | --- |
| Rank | #11 |
| 18m citations | 94 |
| Journal | Nucleic Acids Research |
| Year | 2024 |
| DOI | 10.1093/nar/gkae358 |
| Corresponding authors | Zhaonan Zou |
| Institution | Kumamoto University, Japan |

**Ranking page:** [Topics and Trends in Most Cited Epigenetics and DNA Methylation Papers, Class of 2026](https://pri.pepkio.com/top-papers/epigenetics-and-dna-methylation/2026)

**Paper link:** [10.1093/nar/gkae358](https://doi.org/10.1093/nar/gkae358)

## Topics

ChIP-Atlas · ChIP-seq · ATAC-seq · DNase-seq · Bisulfite-seq · Hi-C · eQTL · ChromHMM · FANTOM5 enhancers · GWAS variants · ClinVar variants · Chromatin structure · regulome · Diff Analysis tool · differentially bound regions · differentially accessible regions · differentially methylated regions · transcriptional regulatory elements · epigenomic landscapes · data-mining suite

## Cite this ranking

```
Pepkio Research Index (PRI). Topics and Trends in Most Cited Epigenetics and DNA Methylation Papers, Class of 2026. https://pri.pepkio.com/top-papers/epigenetics-and-dna-methylation/2026. Accessed 2026-07-21.

Zheng Su, Tinsley Li, Thematic Shifts in Early-High-Impact Cancer Genomics and Diagnostics Research: A Bibliometric and Semantic Analysis. bioRxiv 2026.07.04.736459; doi: https://doi.org/10.64898/2026.07.04.736459
```